Publications

(Also see the list at Google Scholar)

DNA Nanostar Structures with Tunable Auxetic Properties
Y. Du, R. Li, A.S. Madhvacharyula, A.A. Swett, J.H. Choi
bioRxiv (2023)

Motility of Synthetic Cells from Engineered Lipids
A. Shrivastava, Y. Du, H.K. Adepu, R. Li, A.S. Madhvacharyula, A.A. Swett, J.H. Choi
ACS Synthetic Biology, 12, 2789-2801 (2023)

Morphology Engineering of Hybrid Supercapacitor Electrodes from Hierarchical Stem-like Carbon Networks with Flower-like MoS2 Structures
J. Ji, S. Park, J.H. Choi
ACS Omega, 8, 16833-16841 (2023)

Mechanics of Dynamic and Deformable DNA Nanostructures
R. Li, A.S. Madhvacharyula, Y. Du, H.K. Adepu, and J.H. Choi
Chemical Science, 14, 8018-8046 (2023)

Mechanical Deformation Behaviors and Structural Properties of Ligated DNA Crystals
R. Li, M. Zheng, A.S. Madhvacharyula, Y. Du, C. Mao, and J.H. Choi
Biophysical Journal, 121, 4078-4090 (2022)

Recent Progress in 2D Hybrid Heterostructures from Transition Metal Dichalcogenides and Organic Layers: Properties and Applications in Energy and Optoelectronics
J. Ji and J.H. Choi
Nanoscale, 14, 10648-10689 (2022)

High-Performance Supercapacitor Electrodes Based on Composites of MoS2 Nanosheets, Carbon Nanotubes, and ZIF-8 Metal-Organic Framework Nanoparticles
D.N. Houpt, J. Ji, D. Yang, and J.H. Choi
ACS Applied Nano Materials, 5, 1491-1499 (2022)

Understanding the Effects of Dielectric Property, Separation Distance, and Band Alignment on Interlayer Excitons in 2D Hybrid MoS2/WSe2 Heterostructures
J. Ji and J.H. Choi
ACS Applied Electronic Materials, 3, 3052-3059 (2021)

Kinetic DNA Self-Assembly: Simultaneously Co-Folding Complementary DNA Strands into Identical Nanostructures
M. Zheng, Z. Li, L. Liu, M. Li, V.E. Paluzzi, J.H. Choi, and C. Mao
Journal of the American Chemical Society, 143, 20363-20367 (2021)

Engineering the Nanoscaled Morphologies of Linear DNA Homopolymers
M. Zheng, Q. Li, Q. Li, V.E. Paluzzi, J.H. Choi, and C. Mao
Macromolecular Rapid Communications, 42, 2100217 (2021)

Programmable Aggregation of Artificial Cells with DNA Signals
H. Qiu, F. Li, Y. Du, R. Li, J.Y Hyun, S.Y. Lee, and J.H. Choi
ACS Synthetic Biology, 10, 1268-1276 (2021)

Conformational Control of DNA Origami by DNA Oligomers, Intercalators and UV Light
R. Li, H. Chen, H. Lee, and J.H. Choi
Methods and Protocols, 4, 38 (2021)

Elucidating the Mechanical Energy for Cyclization of a DNA Origami Tile
R. Li, H. Chen, H. Lee, and J.H. Choi
Applied Sciences, 11, 2357 (2021)

Topological Assembly of a Deployable Hoberman Flight Ring from DNA
R. Li, H. Chen, and J.H. Choi
Small, 17, 2007069 (2021)

Auxetic Two-Dimensional Nanostructures from DNA
R. Li, H. Chen, and J.H. Choi
Angewandte Chemie International Edition, 60, 7165-7173 (2021)

Mechanistic Understanding of Surface Migration Dynamics with DNA Walkers
Y. Du, J. Pan, H. Qiu, C. Mao, and J.H. Choi
Journal of Physical Chemistry B, 125, 507-517 (2021)

Selective Chemical Modulation of Interlayer Excitons in Atomically Thin Heterostructures
J. Ji, C.M. Delehey, D.N. Houpt, M.K. Heighway, T. Lee, and J.H. Choi
Nano Letters, 20, 2500-2506 (2020)

Layer-Number-Dependent Electronic and Optoelectronic Properties of 2D WSe2-Organic Hybrid Heterojunction
J. Ji and J.H. Choi
Advanced Materials Interfaces, 6, 1900637 (2019)

Perovskite Nickelates as Bio-electronic Interfaces
H.T. Zhang, F. Zhou, F. Li, H. Chan, Q. Wu, Z. Zhang, B. Narayanan, K. Ramadoss, I. Chakraborty, G. Saha, G. Kamath, K. Roy, H. Zhou, A.A. Chubykin, S.K.R.S. Sankaranarayanan, J.H. Choi, and S. Ramanathan
Nature Communications, 10, 1651 (2019)

Mimicking Chemotactic Cell Migration with DNA Programmable Synthetic Vesicles
J. Pan, Y. Du, H. Qiu, L.R. Upton, F. Li, and J.H. Choi
Nano Letters, 19, 9138-9144 (2019)

A Review on Optical Imaging of DNA Nanostructures and Dynamic Processes
Y. Du, J. Pan, and J.H. Choi
Methods and Application in Fluorescence, 7, 012002 (2019)

Local Direction Change of Surface Gliding Microtubules
F. Li, J. Pan, and J.H. Choi
Biotechnology and Bioengineering, 116, 1128-1138 (2019)

Structural DNA Nanotechnology: Artificial Nanostructures for Biomedical Research
Y. Ke, C. Castro, and J.H. Choi
Annual Review of Biomedical Engineering, 20, 377–403 (2018)

Tailoring Photoelectrochemical Properties of Transition Metal Dichalcogenide Nanolayers with Porphyrin Functionalization
H. Zhang, J. Ji, A.A. Gonzalez, and J.H. Choi
Journal of Materials Chemistry C, 5, 11233-11238 (2017)

Single-Walled Carbon Nanotubes as Optical Probes for Bio-sensing and Imaging
J. Pan, F. Li, and J.H. Choi
Journal of Materials Chemistry B, 5, 6511-6522 (2017)

Conformational Effects of UV Light on DNA Origami
H. Chen, R. Li, S. Li, J. Andreasson, and J.H. Choi
Journal of the American Chemical Society, 139, 1380-1383 (2017)

Visible/Near-Infrared Subdiffraction Imaging Reveals the Stochastic Nature of DNA Walkers
J. Pan, T.G. Cha, H. Chen, F. Li, N.A. Bragg, and J.H. Choi
Science Advances, 3, e1601600 (2017)

DNA Binding of Pd(TC3), a Conformable Cationic Porphyrin with a Long-Lived Triplet State
S. Ghimire, M.A. Bork, H. Zhang, P.E. Fanwick, M. Zeller, J.H. Choi, and D.R. McMillin
Dalton Transactions, 45, 14277-14284 (2016)

Engineering Chemically-Exfoliated Large-Area Two-Dimensional MoS2 Nanolayers with Porphyrins for Improved Light Harvesting
H. Zhang, J. Choi, A. Ramani, D. Voiry, S.N. Natoli, M. Chhowalla, D.R. McMillin, and J.H. Choi
ChemPhysChem, 17, 2854-2862 (2016)

A DNAzyme-Mediated Logic Gate for Programming Molecular Capture and Release on DNA Origami
F. Li, H. Chen, J. Pan, T.G. Cha, I. Menditz, and J.H. Choi
Chemical Communications, 52, 8369- 8372 (2016)

DNA Walkers as Transport Vehicles of Nanoparticles along a Carbon Nanotube
J. Pan, T.G. Cha, H. Chen, F. Li, and J.H. Choi
3D DNA Nanostructures - Methods and Protocols, Springer (2016)

DNA Walker-Regulated Cancer Cell Growth Inhibition
F. Li, T.G. Cha, J. Pan, A. Ozcelikkale, B. Han, and J.H. Choi
ChemBioChem, 17, 1138-1141 (2016)

Dynamic and Progressive Control of DNA Origami Conformation by Modulating DNA Helicity with Chemical Adducts
H. Chen, H. Zhang, J. Pan, T.G. Cha, S. Li, J. Andreasson, and J.H. Choi
ACS Nano, 10, 4989−4996 (2016)

Understanding Solvent Effects on the Properties of 2D Transition Metal Dichalcogenides
J. Choi, H. Zhang, H. Du, and J.H. Choi
ACS Applied Materials and Interfaces, 8, 8864–8869 (2016)

Modulating Optoelectronic Properties of 2D Transition Metal Dichalcogenides by Photo-induced Charge Transfer
J. Choi, H. Zhang, and J.H. Choi
ACS Nano, 10, 1671-1680 (2016)

Nanomanufacturing of 2-D Transition Metal Dichalcogenide Materials Using Self-Assembled DNA Nanotubes
J. Choi, H. Chen, F. Li, L. Yang, S.N. Kim, R. Naik, P. Ye, and J.H. Choi
Small, 11, 5520-5527 (2015)

Design Principles of DNA Enzyme-based Walkers: Translocation Kinetics and Photoregulation
T.G. Cha, J. Pan, H. Chen, H.N. Robinson, X. Li, C. Mao, and J.H. Choi
Journal of the American Chemical Society, 137, 9429-9437 (2015)

Regeneration of Light-Harvesting Complexes via Dynamic Replacement of Photodegraded Chromophores
H. Zhang, J. Pan, S. Ghimire, M.A. Bork, M.M. Riccitelli, D.R. McMillin, and J.H. Choi
ACS Applied Materials and Interfaces, 7, 7833-7837 (2015)

Recent Progress on DNA based Walkers
J. Pan, F. Li, T.G. Cha, H. Chen, and J.H. Choi
Current Opinion in Biotechnology, 34, 56-64 (2015)

DNA Origami as Programmable Nanomanufacturing Tools
H. Chen, F. Li, J. Pan, J. Choi, and J.H. Choi
Encyclopedia of Nanotechnology, Springer (2015)

Understanding Photophysical Interactions of Semiconducting Carbon Nanotubes with Porphyrin Chromophores
H. Zhang, M.A. Bork, K.J. Riedy, D.R. McMillin, and J.H. Choi
Journal of Physical Chemistry C, 118, 11612-11619 (2014)

Understanding the Mechanical Properties of DNA Origami Tiles and Controlling the Kinetics of their Folding and Unfolding Reconfiguration
H. Chen, T.W. Weng, M.M. Riccitelli, Y. Cui, J. Irudayaraj, and J.H. Choi
Journal of the American Chemical Society, 136, 6995-7005 (2014)

Single-Stranded DNA Functionalized Single-Walled Carbon Nanotubes for Microbiosensors via Layer-by-Layer Electrostatic Self-Assembly
Z. Kang, X. Yan, Y. Zhang, J. Pan, J. Shi, X. Zhang, Y. Liu, J.H. Choi, and D.M. Porterfield
ACS Applied Materials and Interfaces, 6, 3784-3789 (2014)

Accessibility and External versus Intercalative Binding to DNA as Assessed by Oxygen-Induced Quenching of the Palladium(II)-Containing Cationic Porphyrins Pd(T4) and Pd(tD4)
M.A. Bork, C.G. Gianopoulos, H. Zhang, P.E. Fanwick, J.H. Choi, and D.R. McMillin
Biochemistry, 53, 714-724 (2014)

A Synthetic DNA Motor That Transports Nanoparticles along Carbon Nanotubes
T.G. Cha, J. Pan, H. Chen, J. Salgado, X. Li, C. Mao, and J.H. Choi
Nature Nanotechnology, 9, 39-43 (2014)

Hierarchically Assembled DNA Origami Tubules with Reconfigurable Chirality
H. Chen, T.G. Cha, J. Pan, and J.H. Choi
Nanotechnology, 24, 435601 (2013)

Carbon Nanotubes and Graphene for Photonic Applications
S. Yamashita, Y. Saito, and J.H. Choi
Elsevier (2013)

Carbon Nanotube based Optical Platforms for Biomolecular Detection
J. Pan, T.G. Cha, H. Chen, and J.H. Choi
Carbon Nanotubes and Graphene for Photonic Applications, Elsevier (2013)

Carbon Nanotube Solar Cells
B.A. Baker, H. Zhang, T.G. Cha, and J.H. Choi
Carbon Nanotubes and Graphene for Photonic Applications, Elsevier (2013)

Multiplexed Optical Detection of Plasma Porphyrins Using DNA Aptamer-Functionalized Carbon Nanotubes
J. Pan, H. Zhang, T.G. Cha, H. Chen, and J.H. Choi
Analytical Chemistry, 85, 8391-8396 (2013)

Understanding Oligonucleotide-Templated Nanocrystals: Growth Mechanisms and Surface Properties
T.G. Cha, B.A. Baker, J. Salgado, C.J. Bates, K.H. Chen, A.C. Chang, J.-H. Han, M.S. Strano, and J.H. Choi
ACS Nano, 6, 8136-8143 (2012)

DNA Oligonucleotide Templated Nanohybrids Using Electronic Type Sorted Carbon Nanotubes for Light Harvesting
H. Zhang, B.A. Baker, T.G. Cha, M.D. Sauffer, Y. Wu, N. Hinkson, M.A. Bork, C.M. McShane, K.S. Choi, D.R. McMillin, and J.H. Choi
Advanced Materials, 24, 5447-5451 (2012)

Self-Repairing Photoelectrochemical Complexes based on Nanoscale Synthetic and Biological Components
M.H. Ham, A.A. Boghossian, J.H. Choi, and M.S. Strano
Encyclopedia of Nanotechnology, Springer (2012)

Microbiosensors based on DNA Modified Single-Walled Carbon Nanotube and Pt Black Nanocomposites
J. Shi, T.G. Cha, J.C. Claussen, A.R. Diggs, J.H. Choi, and M.D. Porterfield
Analyst, 136, 4916-4924 (2011)

Optical Nanosensor Architecture for Cell Signaling Molecules Using DNA Aptamer-Coated Carbon Nanotubes
T.G. Cha, B.A. Baker, M.D. Sauffer, J. Salgado, D. Jaroch, J.L. Rickus, D.M. Porterfield, and J.H. Choi
ACS Nano, 5, 4236-4244 (2011)

Biomimetic Strategies for Solar Energy Conversion: A Technical Perspective
A.A. Boghossian, M.H. Ham, J.H. Choi, and M.S. Strano
Energy and Environmental Science, 4, 3834-3843 (2011)

Dynamic Self-Assembly of Nanoscale Components for Solar Energy Conversion
A.A. Boghossian, M.H. Ham, J.H. Choi, and M.S. Strano
Self-Healing at the Nanoscale, Mechanisms and Key Concepts of Natural and Artificial Systems, CRC Press, Taylor and Francis Group (2011)

Dynamics and Reversible Self-Assembly of Photoelectrochemical Complexes on Lipid Bilayer Disks, Photosynthetic Reaction Centers, and Single-Walled Carbon Nanotubes
A.A. Boghossian, J.H. Choi, M.H. Ham, and M.S. Strano
Langmuir, 27, 1599-1609 (2011)

Photoelectrochemical Complexes for Solar Energy Conversion that Chemically and Autonomously Regenerate
M.H. Ham, J.H. Choi, A.A. Boghossian, E.S. Jeng, R.A. Graff, D.A. Heller, A.C. Chang, A. Mattis, T.H. Bayburt, Y.V. Grinkova, A.S. Zeiger, K.V. Vliet, E.K. Hobbie, S.G. Sligar, C.A. Wraight, and M.S. Strano
Nature Chemistry, 2, 929-936 (2010)

Exciton Antennas and Concentrators from Core-Shell and Corrugated Carbon Nanotube Filaments of Homogeneous Composition
J.H. Han, G.L.C. Paulus, R. Maruyama, D.A. Heller, W.J. Kim, P.W. Barone, C.Y. Lee, J.H. Choi, M.-H. Ham, C. Song, C. Fantini, and M.S. Strano
Nature Materials, 9, 833-839 (2010)

Oligonucleotide DNA and RNA as Direct Capping Ligand for Nanocrystals: An Emerging Method for Biological Diagnostics and Therapeutics
B.A. Baker and J.H. Choi
Nano, 4, 189-199 (2009)

DNA Aptamer-Passivated Nanocrystal Synthesis: A Facile Approach for Nanoparticle-based Cancer Cell Growth Inhibition
J.H. Choi, K.H. Chen, J.-H. Han, A.M. Chaffee, and M.S. Strano
Small, 5, 672-675 (2009)

Nanometer Positioning, Parallel Alignment, and Placement of Single Anisotropic Nanoparticles Using Hydrodynamic Forces in Cylindrical Droplets
R. Sharma, C.Y. Lee, J.H. Choi, K. Chen, and M.S. Strano
Nano Letters, 7, 2693-2700 (2007)

Solvatochromism in Single-Walled Carbon Nanotubes
J.H. Choi and M.S. Strano
Applied Physics Letters, 90, Article 223114 (2007)

Temperature Behavior of the Photoluminescence Decay of Semiconducting Carbon Nanotubes: The Effective Lifetime
D. Karaiskaj, A. Mascarenhas, J.H. Choi, R.A. Graff, and M.S. Strano
Physical Review B, 75, Article 113409 (2007)

Multimodal Biomedical Imaging with Asymmetric Single-Walled Carbon Nanotube/Iron Oxide Nanoparticle Complexes
J.H. Choi, F.T. Nguyen, P.W. Barone, D.A. Heller, A.E. Moll, D. Patel, S.A. Boppart, and M.S. Strano
Nano Letters, 7, 861-867 (2007)

Laser Ablation of Nanoscale Particles with 193 nm Light
J.H. Choi, D. Lucas, and C.P. Koshland
Journal of Physics, Conference Series, 59, 54-59 (2007)

Aptamer-Capped Nanocrystal Quantum Dots: A New Method for Label Free Protein Detection
J.H. Choi, K.H. Chen, and M.S. Strano
Journal of the American Chemical Society, 128, 15584-15585 (2006)

In situ, Real-time Detection of Soot Particles Coated with NaCl Using 193 nm Light
J.H. Choi, C.B. Stipe, C.P. Koshland, and D. Lucas
Applied Physics B, 84, 385-388 (2006)

Photochemical Interaction of Polystyrene Nanospheres with 193 nm Pulsed Laser Light
J.H. Choi, D. Lucas, C.P. Koshland, and R.F. Sawyer
Journal of Physical Chemistry B, 109, 23905-23910 (2005)

Measurement of Polystyrene Nanospheres Using Excimer Laser Fragmentation Fluorescence Spectroscopy
J.H. Choi, C.P. Koshland, R.F. Sawyer, and D. Lucas
Applied Spectroscopy, 59, 1203-1208 (2005)

NaCl Particle Interaction with 193 nm Light: Ultraviolet Photofragmentation and Nanoparticle Production
J.H. Choi, C.B. Stipe, C.P. Koshland, R.F. Sawyer, and D. Lucas
Journal of Applied Physics, 97, Article 124315 (2005)

Detection of Lead in Soil with Excimer Laser Fragmentation Fluorescence Spectroscopy
J.H. Choi, C.J. Damm, N.J. O’Donovan, R.F. Sawyer, C.P. Koshland, and D. Lucas
Applied Spectroscopy, 59, 258-261 (2005)

Nanoparticle Production by UV Irradiation of Combustion Generated Soot Particles
C.B. Stipe, J.H. Choi, D. Lucas, R.F. Sawyer, and C.P. Koshland
Journal of Nanoparticle Research, 6, 467-477 (2004)

Flow and Heat(Mass) Transfer Characteristics in an Impingement/Effusion Cooling System with Crossflow
D.H. Rhee, J.H. Choi, and H.H. Cho
Journal of Turbomachinery, 125, 74-82 (2003)

Heat(Mass) Transfer on the Effusion Plate in Impingement-Effusion Cooling Systems
D.H. Rhee, J.H. Choi, and H.H. Cho
Journal of Thermophysics and Heat Transfer, 17, 95-102 (2003)

Heat/Mass Transfer Characteristics on Turbine Shroud with Blade Tip Clearance
H.H. Cho, D.H. Rhee, and J.H. Choi
Annals of the New York Academy of Sciences, 934, 281-288 (2001)

Patents

Ternary Composite Material, Supercapacitor, and Related Methods
J.H. Choi, D. Houpt, J. Ji
US 2023/0187146 A1

Ultralow Concentration Sensing of Bio-Matter with Perovskite Nickelate Devices and Arrays
H. Zhang, F. Zuo, F. Li, J.H. Choi, S. Ramanathan
US 2022/0025425 A1

Microbiosensors based on DNA Modified Single-Walled Carbon Nanotube and Pt Black Nanocomposites
D.M. Porterfield, T.G. Cha, J.H. Choi, J.C. Claussen, A.R. Diggs, J. Shi
US 8882977 B2